model of DCN pyramidal neuron
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Things tested and to do:
ccstim: called by test_stim, but does ot appear to exist.
stim does not provide all the protocols tested in test_stim
test_circuit.py:
File "test_circuit.py", line 42, in <module>
bushy.resolve_inputs(depth=2)
File "/Users/pbmanis/Desktop/Python/cnmodel/cnmodel/populations/population.py", line 133, in resolve_inputs
pre_cells = self.connect_pop_to_cell(pop, i)
File "/Users/pbmanis/Desktop/Python/cnmodel/cnmodel/populations/population.py", line 166, in connect_pop_to_cell
pre_cell.connect(cell)
File "/Users/pbmanis/Desktop/Python/cnmodel/cnmodel/cells/cell.py", line 217, in connect
synapse = synapses.Synapse(self, pre_opts, post_cell, post_opts, **kwds)
File "/Users/pbmanis/Desktop/Python/cnmodel/cnmodel/synapses/synapse.py", line 13, in __init__
self.terminal = pre_cell.make_terminal(post_cell, **pre_opts)
File "/Users/pbmanis/Desktop/Python/cnmodel/cnmodel/cells/cell.py", line 246, in make_terminal
post_cell.__class__.__name__))
NotImplementedError: Cannot make Terminal connecting TStellateRothman => BushyRothman
test_mechanisms:
some mechanisms do not make sense to be tested in this routine; need to exclude (done)
test_physiology: ok
test_populations : not sure what this is supposed to do.
test_sgc_input.py : works.
test_sgc_input_phaselocking: no bushy cell spikes. Is inputs strength scaled correctly?
test_simple_synapses works.
test_sound_stim works
test_synapses (more detailed test) works
toy_model : works.