model of DCN pyramidal neuron
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"""
=========
traitsdoc
=========
Sphinx extension that handles docstrings in the Numpy standard format, [1]
and support Traits [2].
This extension can be used as a replacement for ``numpydoc`` when support
for Traits is required.
.. [1] http://projects.scipy.org/numpy/wiki/CodingStyleGuidelines#docstring-standard
.. [2] http://code.enthought.com/projects/traits/
"""
from __future__ import division, absolute_import, print_function
import inspect
import os
import pydoc
import collections
from . import docscrape
from . import docscrape_sphinx
from .docscrape_sphinx import SphinxClassDoc, SphinxFunctionDoc, SphinxDocString
from . import numpydoc
from . import comment_eater
class SphinxTraitsDoc(SphinxClassDoc):
def __init__(self, cls, modulename="", func_doc=SphinxFunctionDoc):
if not inspect.isclass(cls):
raise ValueError("Initialise using a class. Got %r" % cls)
self._cls = cls
if modulename and not modulename.endswith("."):
modulename += "."
self._mod = modulename
self._name = cls.__name__
self._func_doc = func_doc
docstring = pydoc.getdoc(cls)
docstring = docstring.split("\n")
# De-indent paragraph
try:
indent = min(len(s) - len(s.lstrip()) for s in docstring if s.strip())
except ValueError:
indent = 0
for n, line in enumerate(docstring):
docstring[n] = docstring[n][indent:]
self._doc = docscrape.Reader(docstring)
self._parsed_data = {
"Signature": "",
"Summary": "",
"Description": [],
"Extended Summary": [],
"Parameters": [],
"Returns": [],
"Raises": [],
"Warns": [],
"Other Parameters": [],
"Traits": [],
"Methods": [],
"See Also": [],
"Notes": [],
"References": "",
"Example": "",
"Examples": "",
"index": {},
}
self._parse()
def _str_summary(self):
return self["Summary"] + [""]
def _str_extended_summary(self):
return self["Description"] + self["Extended Summary"] + [""]
def __str__(self, indent=0, func_role="func"):
out = []
out += self._str_signature()
out += self._str_index() + [""]
out += self._str_summary()
out += self._str_extended_summary()
for param_list in ("Parameters", "Traits", "Methods", "Returns", "Raises"):
out += self._str_param_list(param_list)
out += self._str_see_also("obj")
out += self._str_section("Notes")
out += self._str_references()
out += self._str_section("Example")
out += self._str_section("Examples")
out = self._str_indent(out, indent)
return "\n".join(out)
def looks_like_issubclass(obj, classname):
""" Return True if the object has a class or superclass with the given class
name.
Ignores old-style classes.
"""
t = obj
if t.__name__ == classname:
return True
for klass in t.__mro__:
if klass.__name__ == classname:
return True
return False
def get_doc_object(obj, what=None, config=None):
if what is None:
if inspect.isclass(obj):
what = "class"
elif inspect.ismodule(obj):
what = "module"
elif isinstance(obj, collections.Callable):
what = "function"
else:
what = "object"
if what == "class":
doc = SphinxTraitsDoc(obj, "", func_doc=SphinxFunctionDoc, config=config)
if looks_like_issubclass(obj, "HasTraits"):
for name, trait, comment in comment_eater.get_class_traits(obj):
# Exclude private traits.
if not name.startswith("_"):
doc["Traits"].append((name, trait, comment.splitlines()))
return doc
elif what in ("function", "method"):
return SphinxFunctionDoc(obj, "", config=config)
else:
return SphinxDocString(pydoc.getdoc(obj), config=config)
def setup(app):
# init numpydoc
numpydoc.setup(app, get_doc_object)